BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021H10LP1|AL427835
(881 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1284 678 0.0
3x_Contig644 262 7e-70
>3x_Contig1284
Length = 6170
Score = 678 bits (341), Expect = 0.0
Identities = 345/347 (99%)
Strand = Plus / Plus
Query: 535 agaaggactctgtttatctttatcagtaggtgatttgatggagaacttcctctgtatttt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 agaaggactctgtttatctttatcagtaggtgatttgatggagaacttcctctgtatttt 77
Query: 595 ttcgaaaacctgtttctttgatgtgggactaatggcggtgaacgaggaattttttaattt 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ttcgaaaacctgtttctttgatgtgggactaatggcggtgaacgaggaattttttaattt 137
Query: 655 acttttgagcgtgtggttggatgcatctacgacgctttgataaggtagcttatgtttgat 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 acttttgagcgtgtggttggatgcatctacgacgctttgataaggtagcttatgtttgat 197
Query: 715 gacagaaggtgttgatgtagcatcagaaccggaataattagttgggtattcattcatcca 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gacagaaggtgttgatgtagcatcagaaccggaataattagttgggtattcattcatcca 257
Query: 775 gtttttttcgatagcgatttcaagctcaggtgtcagcgtctgtgcacttgcctttaaggr 834
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gtttttttcgatagcgatttcaagctcaggtgtcagcgtctgtgcacttgcctttaagga 317
Query: 835 aacgaatctctctctgggttgattgcacactttgatatctcctttag 881
||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 318 aacgaatctctctctggtttgattgcacactttgatatctcctttag 364
>3x_Contig644
Length = 3211
Score = 262 bits (132), Expect = 7e-70
Identities = 135/137 (98%)
Strand = Plus / Plus
Query: 1 atccttttctctgtncaacagcatgtctttattcttgttccagtaatcaatcgtaattgt 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3071 atccttttctctgttcaacagcatgtctttattcttgttccagtaatcaatcgtaattgt 3130
Query: 61 gctgttaccgatatccgtattcaaggctggctgagacactgagttttgagtagaatatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3131 gctgttaccgatatccgtattcaaggctggctgagacactgagttttgagtagaatatac 3190
Query: 121 ggcgtgctcmggttgaa 137
||||||||| |||||||
Sbjct: 3191 ggcgtgctccggttgaa 3207
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6160
Number of Sequences: 1807
Number of extensions: 6160
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 2
length of query: 881
length of database: 10,358,551
effective HSP length: 16
effective length of query: 865
effective length of database: 10,329,639
effective search space: 8935137735
effective search space used: 8935137735
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)